PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_66537.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 120aa    MW: 13607.4 Da    PI: 7.7688
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_66537.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.23e-1033796128
           NAM  96 kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                   +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  MLOC_66537.2   3 DGRHKGCKKILVLYinFGKTRKAEKTNWVMHQYHL 37 
                   56789*********766899**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.068156IPR003441NAC domain
SuperFamilySSF1019411.7E-11356IPR003441NAC domain
PfamPF023652.4E-4837IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MVDGRHKGCK KILVLYINFG KTRKAEKTNW VMHQYHLGDL EDEKEGELIV SKVFYQTQPR  60
QSAAATTSTL LHEPSTAAAV QMLRQQHQML KQGDEMNKGN EGQDQQQQKF DHSPAGLEGL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFN5644301e-92FN564430.1 Triticum aestivum chromosome 3B-specific BAC library, contig ctg0464b.
GenBankHG6703061e-92HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008655702.11e-31PREDICTED: uncharacterized protein LOC103634916 isoform X1
RefseqXP_008655703.11e-31PREDICTED: uncharacterized protein LOC103634916 isoform X2
RefseqXP_008655704.19e-32PREDICTED: uncharacterized protein LOC103634916 isoform X3
RefseqXP_008655705.18e-32PREDICTED: uncharacterized protein LOC103634916 isoform X4
SwissprotO494592e-27NAC73_ARATH; NAC domain-containing protein 73
TrEMBLM0Y7Q78e-84M0Y7Q7_HORVD; Uncharacterized protein
TrEMBLM0Y7Q82e-86M0Y7Q8_HORVD; Uncharacterized protein
STRINGMLOC_66537.12e-83(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.13e-25NAC domain containing protein 75